Partners - IMBT Bioinformatics Research

News from the group:

Research Exchange Fellowships - IAESTE (apply)

CAMDA 2023 - ISMB Conference Track, 26-27 July, Lyon, France (read more)

World-leading patient stratification - graph based cancer data integration (read more)

Confirming molecular mechanisms of tendon regeneration - a powerful ovine fetal model (read more)

CAMDA 2022
ISMB Conference Track,
11-12 July, Madison, USA
(read more)

NVIDIA GTC Best Poster Award
for MM Kańduła
at GTC'18

Outstanding Presentation Prize
for MM Kańduła
at CAMDA'17

Outstanding Presentation Prize
for PP Łabaj
at CAMDA'15 (photo)

Austrian Marshall Plan Foundation scholarship
for MM Kańduła
at Boston University

OeAW APART fellowship
for PP Łabaj
(photo)

Sequencing Quality Control (SEQC) project,
MAQC Consortium 2011–2014 (read more)

Host–parasite interactions in biocontrol, WWTF grant 2010–2013 (read more)

Power and limitations of RNA-Seq,
FDA SEQC, Nature Biotechnology (read more)

Characterization and improvement of RNA-Seq precision,
Bioinformatics (read more)

Impact of heavy tails in microarray analysis, Bioinformatics (read more)

Novel conserved repeats in sorting signals,
FEBS Journal (read more)

Sound sensation gene,
Nature communications
(read more)

RNA interference in ageing research,
Gerontology (read more)

The department prides itself in a flat hierarchy and an interdisciplinary faculty.

Key partners past & present

David P. Kreil, Ph.D.
IMBT Bioinformatics Research, Head

Integration of computational and quantitative experimental methods

Peter Sykacek, Ph.D.
Analytical Methods Development (external since 2015)

Probabilistic models, sensor fusion, data analysis

Nancy Stralis Pavese, Ph.D.
Genomics lab (external since 2015)

Genome-scale quantitative assays, method development & optimization, Drosophila host–parasite interactions, meta-genomics

Paweł P. Łabaj, Ph.D.
Austrian Academy of Sciences, APART research fellow

Gene expression analysis, data integration and workflow systems

Maciej M. Kańduła, Ph.D.
Marshall Plan Foundation, Research fellow

Heterogeneous data integration, workflow systems, analysis automation

Sinan Gültekin, Ph.D.
Post-doctoral research fellow

Quantitative assays, method development & optimization, model organisms

Microarray analysis, expression analyses

Data analysis

Alexandra Graf, Ph.D.
FH Professor

Sequence analysis